Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PGUG_00362 | PGUG_00690 | A5DAQ7 | A5DBN5 | DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes. | WD_REPEATS_REGION domain-containing protein. | 0.741 |
PGUG_00362 | PGUG_00869 | A5DAQ7 | A5DC64 | DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes. | Uncharacterized protein. | 0.982 |
PGUG_00362 | PGUG_02445 | A5DAQ7 | A5DGP4 | DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes. | Ubiquitin-like domain-containing protein. | 0.625 |
PGUG_00362 | PGUG_03649 | A5DAQ7 | A5DK48 | DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes. | Uncharacterized protein. | 0.559 |
PGUG_00362 | PGUG_04159 | A5DAQ7 | A5DLK8 | DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes. | CULLIN_2 domain-containing protein; Belongs to the cullin family. | 0.917 |
PGUG_00362 | PGUG_04850 | A5DAQ7 | A5DNJ9 | DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes. | MPN domain-containing protein. | 0.789 |
PGUG_00445 | PGUG_00690 | A5DAZ0 | A5DBN5 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | WD_REPEATS_REGION domain-containing protein. | 0.835 |
PGUG_00445 | PGUG_00869 | A5DAZ0 | A5DC64 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | Uncharacterized protein. | 0.839 |
PGUG_00445 | PGUG_03649 | A5DAZ0 | A5DK48 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | Uncharacterized protein. | 0.978 |
PGUG_00445 | PGUG_04159 | A5DAZ0 | A5DLK8 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | CULLIN_2 domain-containing protein; Belongs to the cullin family. | 0.743 |
PGUG_00445 | PGUG_04850 | A5DAZ0 | A5DNJ9 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | MPN domain-containing protein. | 0.683 |
PGUG_00445 | RPB2 | A5DAZ0 | A5DHT2 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | DNA-directed RNA polymerase II subunit RPB2; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Second largest component of RNA polymerase II which synthesizes mRNA precursors and many functional non-coding RNAs. Proposed to contribute to the polymerase catalytic activity and forms the polymerase active center together with the largest subunit. Pol II is the central component of the basal RNA polymerase II transcription machinery. It is composed of mobile elements that move relative to each other. RPB2 is [...] | 0.999 |
PGUG_00690 | PGUG_00362 | A5DBN5 | A5DAQ7 | WD_REPEATS_REGION domain-containing protein. | DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes. | 0.741 |
PGUG_00690 | PGUG_00445 | A5DBN5 | A5DAZ0 | WD_REPEATS_REGION domain-containing protein. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.835 |
PGUG_00690 | PGUG_00869 | A5DBN5 | A5DC64 | WD_REPEATS_REGION domain-containing protein. | Uncharacterized protein. | 0.999 |
PGUG_00690 | PGUG_02445 | A5DBN5 | A5DGP4 | WD_REPEATS_REGION domain-containing protein. | Ubiquitin-like domain-containing protein. | 0.605 |
PGUG_00690 | PGUG_03649 | A5DBN5 | A5DK48 | WD_REPEATS_REGION domain-containing protein. | Uncharacterized protein. | 0.975 |
PGUG_00690 | PGUG_04159 | A5DBN5 | A5DLK8 | WD_REPEATS_REGION domain-containing protein. | CULLIN_2 domain-containing protein; Belongs to the cullin family. | 0.943 |
PGUG_00690 | PGUG_04850 | A5DBN5 | A5DNJ9 | WD_REPEATS_REGION domain-containing protein. | MPN domain-containing protein. | 0.759 |
PGUG_00690 | PGUG_04867 | A5DBN5 | A5DNL6 | WD_REPEATS_REGION domain-containing protein. | Uncharacterized protein. | 0.777 |
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