PGUG_03111 protein (Meyerozyma guilliermondii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

PGUG_03111

Protein kinase domain-containing protein. (774 aa)

Predicted Functional Partners:

PGUG_03693

0.686

PGUG_03746

0.632

PGUG_05512

0.625

SDS23

0.556

CAF20

0.540

PGUG_00888

0.518

PGUG_00744

0.516

PGUG_04819

0.498

PGUG_02756

0.469

PGUG_04130

0.468

Your Current Organism:

Meyerozyma guilliermondii

NCBI taxonomy Id: 294746
Other names: M. guilliermondii ATCC 6260, Meyerozyma guilliermondii ATCC 6260, Pichia guilliermondii ATCC 6260

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CAF20	PGUG_03111	A5DEY7	A5DIL0	Cap-associated protein CAF20; Acts as an inhibitor of cap-dependent translation. Competes with eIF4G1 and EAP1 for binding to eIF4E and interferes with the formation of the eIF4F complex, inhibiting translation and stabilizing mRNA (By similarity); Belongs to the CAF20 family.	Protein kinase domain-containing protein.	0.540
CAF20	PGUG_03746	A5DEY7	A5DKE5	Cap-associated protein CAF20; Acts as an inhibitor of cap-dependent translation. Competes with eIF4G1 and EAP1 for binding to eIF4E and interferes with the formation of the eIF4F complex, inhibiting translation and stabilizing mRNA (By similarity); Belongs to the CAF20 family.	MIF4G domain-containing protein.	0.725
PGUG_00744	PGUG_03111	A5DBT9	A5DIL0	Uncharacterized protein.	Protein kinase domain-containing protein.	0.516
PGUG_00744	PGUG_04819	A5DBT9	A5DNG8	Uncharacterized protein.	Protein kinase domain-containing protein.	0.775
PGUG_00744	PGUG_05512	A5DBT9	A5DQG1	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.962
PGUG_00888	PGUG_03111	A5DC83	A5DIL0	MFS domain-containing protein.	Protein kinase domain-containing protein.	0.518
PGUG_00888	PGUG_03693	A5DC83	A5DK92	MFS domain-containing protein.	Diphthami_syn_2 domain-containing protein.	0.807
PGUG_02756	PGUG_03111	A5DHK5	A5DIL0	Uncharacterized protein.	Protein kinase domain-containing protein.	0.469
PGUG_02756	PGUG_04819	A5DHK5	A5DNG8	Uncharacterized protein.	Protein kinase domain-containing protein.	0.628
PGUG_02756	PGUG_05512	A5DHK5	A5DQG1	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.539
PGUG_03111	CAF20	A5DIL0	A5DEY7	Protein kinase domain-containing protein.	Cap-associated protein CAF20; Acts as an inhibitor of cap-dependent translation. Competes with eIF4G1 and EAP1 for binding to eIF4E and interferes with the formation of the eIF4F complex, inhibiting translation and stabilizing mRNA (By similarity); Belongs to the CAF20 family.	0.540
PGUG_03111	PGUG_00744	A5DIL0	A5DBT9	Protein kinase domain-containing protein.	Uncharacterized protein.	0.516
PGUG_03111	PGUG_00888	A5DIL0	A5DC83	Protein kinase domain-containing protein.	MFS domain-containing protein.	0.518
PGUG_03111	PGUG_02756	A5DIL0	A5DHK5	Protein kinase domain-containing protein.	Uncharacterized protein.	0.469
PGUG_03111	PGUG_03693	A5DIL0	A5DK92	Protein kinase domain-containing protein.	Diphthami_syn_2 domain-containing protein.	0.686
PGUG_03111	PGUG_03746	A5DIL0	A5DKE5	Protein kinase domain-containing protein.	MIF4G domain-containing protein.	0.632
PGUG_03111	PGUG_04130	A5DIL0	A5DLH9	Protein kinase domain-containing protein.	Non-specific serine/threonine protein kinase.	0.468
PGUG_03111	PGUG_04819	A5DIL0	A5DNG8	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.498
PGUG_03111	PGUG_05512	A5DIL0	A5DQG1	Protein kinase domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.625
PGUG_03111	SDS23	A5DIL0	A5DNL9	Protein kinase domain-containing protein.	Protein SDS23; Involved in DNA replication and cell separation. Belongs to the SDS23 family.	0.556