Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PGUG_03424 | PGUG_03975 | A5DJH3 | A5DL24 | Uncharacterized protein. | Protein transport protein SEC61 alpha subunit. | 0.484 |
PGUG_03424 | PGUG_04676 | A5DJH3 | A5DN25 | Uncharacterized protein. | Rhomboid domain-containing protein. | 0.457 |
PGUG_03424 | PGUG_05729 | A5DJH3 | A5DR28 | Uncharacterized protein. | Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family. | 0.592 |
PGUG_03975 | PGUG_03424 | A5DL24 | A5DJH3 | Protein transport protein SEC61 alpha subunit. | Uncharacterized protein. | 0.484 |
PGUG_03975 | PGUG_05729 | A5DL24 | A5DR28 | Protein transport protein SEC61 alpha subunit. | Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family. | 0.596 |
PGUG_04676 | PGUG_03424 | A5DN25 | A5DJH3 | Rhomboid domain-containing protein. | Uncharacterized protein. | 0.457 |
PGUG_05729 | PGUG_03424 | A5DR28 | A5DJH3 | Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family. | Uncharacterized protein. | 0.592 |
PGUG_05729 | PGUG_03975 | A5DR28 | A5DL24 | Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family. | Protein transport protein SEC61 alpha subunit. | 0.596 |