Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PGUG_00589 | PGUG_04539 | A5DBD4 | A5DMN8 | Uncharacterized protein. | Uncharacterized protein. | 0.408 |
PGUG_00589 | PGUG_05297 | A5DBD4 | A5DPU6 | Uncharacterized protein. | Uncharacterized protein. | 0.831 |
PGUG_01450 | PGUG_04539 | A5DDU9 | A5DMN8 | Methyltranfer_dom domain-containing protein. | Uncharacterized protein. | 0.499 |
PGUG_01802 | PGUG_04539 | A5DEV1 | A5DMN8 | Uncharacterized protein. | Uncharacterized protein. | 0.441 |
PGUG_04539 | PGUG_00589 | A5DMN8 | A5DBD4 | Uncharacterized protein. | Uncharacterized protein. | 0.408 |
PGUG_04539 | PGUG_01450 | A5DMN8 | A5DDU9 | Uncharacterized protein. | Methyltranfer_dom domain-containing protein. | 0.499 |
PGUG_04539 | PGUG_01802 | A5DMN8 | A5DEV1 | Uncharacterized protein. | Uncharacterized protein. | 0.441 |
PGUG_04539 | PGUG_04809 | A5DMN8 | A5DNF8 | Uncharacterized protein. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.409 |
PGUG_04539 | PGUG_05132 | A5DMN8 | A5DPD1 | Uncharacterized protein. | Uncharacterized protein. | 0.484 |
PGUG_04539 | PGUG_05297 | A5DMN8 | A5DPU6 | Uncharacterized protein. | Uncharacterized protein. | 0.425 |
PGUG_04539 | PGUG_05508 | A5DMN8 | A5DQF7 | Uncharacterized protein. | Uncharacterized protein. | 0.444 |
PGUG_04539 | SPB4 | A5DMN8 | A5DGM4 | Uncharacterized protein. | ATP-dependent rRNA helicase SPB4; ATP-binding RNA helicase involved in the biogenesis of 60S ribosomal subunits. Binds 90S pre-ribosomal particles and dissociates from pre-60S ribosomal particles after processing of 27SB pre-rRNA. Required for the normal formation of 18S rRNA through the processing of pre-rRNAs at sites A0, A1 and A2, and the normal formation of 25S and 5.8S rRNAs through the processing of pre-rRNAs at sites C1 and C2. | 0.507 |
PGUG_04809 | PGUG_04539 | A5DNF8 | A5DMN8 | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | Uncharacterized protein. | 0.409 |
PGUG_05132 | PGUG_04539 | A5DPD1 | A5DMN8 | Uncharacterized protein. | Uncharacterized protein. | 0.484 |
PGUG_05297 | PGUG_00589 | A5DPU6 | A5DBD4 | Uncharacterized protein. | Uncharacterized protein. | 0.831 |
PGUG_05297 | PGUG_04539 | A5DPU6 | A5DMN8 | Uncharacterized protein. | Uncharacterized protein. | 0.425 |
PGUG_05297 | PGUG_05508 | A5DPU6 | A5DQF7 | Uncharacterized protein. | Uncharacterized protein. | 0.955 |
PGUG_05508 | PGUG_04539 | A5DQF7 | A5DMN8 | Uncharacterized protein. | Uncharacterized protein. | 0.444 |
PGUG_05508 | PGUG_05297 | A5DQF7 | A5DPU6 | Uncharacterized protein. | Uncharacterized protein. | 0.955 |
SPB4 | PGUG_04539 | A5DGM4 | A5DMN8 | ATP-dependent rRNA helicase SPB4; ATP-binding RNA helicase involved in the biogenesis of 60S ribosomal subunits. Binds 90S pre-ribosomal particles and dissociates from pre-60S ribosomal particles after processing of 27SB pre-rRNA. Required for the normal formation of 18S rRNA through the processing of pre-rRNAs at sites A0, A1 and A2, and the normal formation of 25S and 5.8S rRNAs through the processing of pre-rRNAs at sites C1 and C2. | Uncharacterized protein. | 0.507 |