STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGUG_0473960S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family. (202 aa)    
Predicted Functional Partners:
PGUG_00328
S4 RNA-binding domain-containing protein.
   
 
 0.999
PGUG_00363
WD_REPEATS_REGION domain-containing protein.
   
 
 0.999
PGUG_00379
60S acidic ribosomal protein P0; Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome t [...]
   
 0.999
PGUG_00383
40S ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.
   
 
 0.999
PGUG_00657
60S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family.
   
 0.999
PGUG_00719
Uncharacterized protein.
   
 0.999
PGUG_00989
60S ribosomal protein L33-A.
   
 0.999
PGUG_01007
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
 
 0.999
PGUG_01161
Uncharacterized protein.
   
 0.999
PGUG_01171
60S ribosomal protein L10.
   
 0.999
Your Current Organism:
Meyerozyma guilliermondii
NCBI taxonomy Id: 294746
Other names: M. guilliermondii ATCC 6260, Meyerozyma guilliermondii ATCC 6260, Pichia guilliermondii ATCC 6260
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.