Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PGUG_00591 | PGUG_01273 | A5DBD6 | A5DDC2 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | WD_REPEATS_REGION domain-containing protein. | 0.791 |
PGUG_00591 | PGUG_01287 | A5DBD6 | A5DDD6 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | WD_REPEATS_REGION domain-containing protein. | 0.876 |
PGUG_00591 | PGUG_01468 | A5DBD6 | A5DDW7 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | Uncharacterized protein. | 0.979 |
PGUG_00591 | PGUG_01598 | A5DBD6 | A5DE97 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | Uncharacterized protein. | 0.953 |
PGUG_00591 | PGUG_02753 | A5DBD6 | A5DHK2 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | Brix domain-containing protein. | 0.995 |
PGUG_00591 | PGUG_03842 | A5DBD6 | A5DKP1 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | Uncharacterized protein. | 0.749 |
PGUG_00591 | PGUG_04088 | A5DBD6 | A5DLD7 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. | 0.984 |
PGUG_00591 | PGUG_04796 | A5DBD6 | A5DNE5 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | Uncharacterized protein. | 0.943 |
PGUG_00591 | PGUG_05260 | A5DBD6 | A5DPQ9 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | WD_REPEATS_REGION domain-containing protein. | 0.882 |
PGUG_00591 | PGUG_05337 | A5DBD6 | A5DPY6 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | Brix domain-containing protein. | 0.989 |
PGUG_01273 | PGUG_00591 | A5DDC2 | A5DBD6 | WD_REPEATS_REGION domain-containing protein. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.791 |
PGUG_01273 | PGUG_01287 | A5DDC2 | A5DDD6 | WD_REPEATS_REGION domain-containing protein. | WD_REPEATS_REGION domain-containing protein. | 0.999 |
PGUG_01273 | PGUG_01468 | A5DDC2 | A5DDW7 | WD_REPEATS_REGION domain-containing protein. | Uncharacterized protein. | 0.804 |
PGUG_01273 | PGUG_01598 | A5DDC2 | A5DE97 | WD_REPEATS_REGION domain-containing protein. | Uncharacterized protein. | 0.953 |
PGUG_01273 | PGUG_02753 | A5DDC2 | A5DHK2 | WD_REPEATS_REGION domain-containing protein. | Brix domain-containing protein. | 0.804 |
PGUG_01273 | PGUG_03842 | A5DDC2 | A5DKP1 | WD_REPEATS_REGION domain-containing protein. | Uncharacterized protein. | 0.411 |
PGUG_01273 | PGUG_04088 | A5DDC2 | A5DLD7 | WD_REPEATS_REGION domain-containing protein. | Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. | 0.770 |
PGUG_01273 | PGUG_04796 | A5DDC2 | A5DNE5 | WD_REPEATS_REGION domain-containing protein. | Uncharacterized protein. | 0.803 |
PGUG_01273 | PGUG_05260 | A5DDC2 | A5DPQ9 | WD_REPEATS_REGION domain-containing protein. | WD_REPEATS_REGION domain-containing protein. | 0.859 |
PGUG_01273 | PGUG_05337 | A5DDC2 | A5DPY6 | WD_REPEATS_REGION domain-containing protein. | Brix domain-containing protein. | 0.835 |
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