STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTRG_00455Cleavage and polyadenylation specificity factor subunit 2. (870 aa)    
Predicted Functional Partners:
CTRG_00150
CPSF_A domain-containing protein.
   
 0.999
CTRG_01537
Protein YTH1.
    
 0.999
CTRG_01665
Uncharacterized protein.
   
0.999
CTRG_04093
Protein PFS2.
    
 0.999
CTRG_04877
DUF3453 domain-containing protein.
   
 0.999
CTRG_06017
Fip1 domain-containing protein.
    
 0.999
CTRG_00201
Uncharacterized protein.
    
 0.998
CTRG_00780
Protein SSU72.
   
 0.996
CTRG_04150
WD_REPEATS_REGION domain-containing protein.
   
 0.996
CTRG_02889
Uncharacterized protein.
   
 0.995
Your Current Organism:
Candida tropicalis
NCBI taxonomy Id: 294747
Other names: C. tropicalis MYA-3404, Candida tropicalis MYA-3404, Candida tropicalis T1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.