STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTRG_00476Uncharacterized protein. (282 aa)    
Predicted Functional Partners:
CTRG_04380
Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.
   
  
 0.617
CTRG_04257
Zn(2)-C6 fungal-type domain-containing protein.
   
  
 0.616
CTRG_02294
TEA domain-containing protein.
      
 0.564
CTRG_04159
Transcription factor CPH1.
      
 0.550
CTRG_04979
Uncharacterized protein.
      
 0.550
CTRG_02064
Protein ras-1.
      
 0.549
CTRG_04455
60S ribosomal protein L23, mitochondrial.
      
 0.544
CTRG_00608
Uncharacterized protein.
      
 0.543
CTRG_02813
Uncharacterized protein.
      
 0.543
Your Current Organism:
Candida tropicalis
NCBI taxonomy Id: 294747
Other names: C. tropicalis MYA-3404, Candida tropicalis MYA-3404, Candida tropicalis T1
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