STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTRG_00727Uncharacterized protein. (295 aa)    
Predicted Functional Partners:
CTRG_04611
USP domain-containing protein; Belongs to the peptidase C19 family.
   
  
 0.801
CTRG_03477
Uncharacterized protein.
   
  
 0.541
CTRG_00815
Uncharacterized protein.
      
 0.527
CTRG_04484
F-box domain-containing protein.
      
 0.527
CTRG_05951
PHB domain-containing protein.
   
 
 0.481
CTRG_05416
Sugar transporter STL1; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
      
 0.454
CTRG_01636
Cytochrome c1, mitochondrial.
   
 
 0.436
CTRG_01110
NADH-ubiquinone oxidoreductase 24 kDa subunit, mitochondrial.
   
  
 0.408
Your Current Organism:
Candida tropicalis
NCBI taxonomy Id: 294747
Other names: C. tropicalis MYA-3404, Candida tropicalis MYA-3404, Candida tropicalis T1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.