STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTRG_02001t-SNARE coiled-coil homology domain-containing protein. (150 aa)    
Predicted Functional Partners:
CTRG_03772
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.999
CTRG_04361
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
   
 0.999
CTRG_04657
Uncharacterized protein.
   
 0.999
CTRG_05064
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
    
 0.999
CTRG_04319
Uncharacterized protein; Belongs to the synaptobrevin family.
    
 0.998
CTRG_03890
Uncharacterized protein.
    
 0.952
CTRG_00950
Uncharacterized protein.
    
 0.942
CTRG_03847
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
    
 0.855
CTRG_04567
GTP-binding protein ypt1.
    
 0.831
CTRG_05492
Uncharacterized protein.
    
 0.820
Your Current Organism:
Candida tropicalis
NCBI taxonomy Id: 294747
Other names: C. tropicalis MYA-3404, Candida tropicalis MYA-3404, Candida tropicalis T1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.