STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTRG_01806Uncharacterized protein. (599 aa)    
Predicted Functional Partners:
CTRG_00110
FAD-binding FR-type domain-containing protein.
   
  
 0.761
CTRG_04121
BZIP domain-containing protein.
   
  
 0.737
CTRG_03403
Uncharacterized protein.
   
 
 0.731
CTRG_03418
Uncharacterized protein.
   
 
 0.731
CTRG_03689
Plasma membrane iron permease.
   
 
 0.705
CTRG_03698
Plasma membrane iron permease.
   
 
 0.694
CTRG_01655
FAD-binding FR-type domain-containing protein.
   
  
 0.638
CTRG_05969
HMA domain-containing protein.
   
  
 0.602
CTRG_04302
Uncharacterized protein.
      
 0.594
CTRG_03356
Uncharacterized protein.
    
 
 0.569
Your Current Organism:
Candida tropicalis
NCBI taxonomy Id: 294747
Other names: C. tropicalis MYA-3404, Candida tropicalis MYA-3404, Candida tropicalis T1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.