Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CTRG_00520 | CTRG_01546 | C5M381 | C5M6R5 | 40S ribosomal protein S3. | 40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. | 0.999 |
CTRG_00520 | CTRG_02542 | C5M381 | C5M820 | 40S ribosomal protein S3. | 20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. | 0.993 |
CTRG_00520 | CTRG_02811 | C5M381 | C5M8T9 | 40S ribosomal protein S3. | Casein kinase I isoform epsilon; Belongs to the protein kinase superfamily. | 0.984 |
CTRG_00520 | CTRG_03084 | C5M381 | C5MAJ2 | 40S ribosomal protein S3. | Ribosome biogenesis protein TSR1. | 0.980 |
CTRG_00520 | CTRG_03103 | C5M381 | C5MAL1 | 40S ribosomal protein S3. | 40S ribosomal protein S20. | 0.999 |
CTRG_00520 | CTRG_03107 | C5M381 | C5MAL5 | 40S ribosomal protein S3. | Serine/threonine-protein kinase RIO2. | 0.998 |
CTRG_00520 | CTRG_03301 | C5M381 | C5MB59 | 40S ribosomal protein S3. | S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. | 0.999 |
CTRG_00520 | CTRG_05147 | C5M381 | C5MGF4 | 40S ribosomal protein S3. | Protein ENP1. | 0.998 |
CTRG_00520 | CTRG_05780 | C5M381 | C5MI87 | 40S ribosomal protein S3. | Uncharacterized protein. | 0.998 |
CTRG_00520 | CTRG_05813 | C5M381 | C5MIC0 | 40S ribosomal protein S3. | KH domain-containing protein. | 0.959 |
CTRG_01546 | CTRG_00520 | C5M6R5 | C5M381 | 40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. | 40S ribosomal protein S3. | 0.999 |
CTRG_01546 | CTRG_02542 | C5M6R5 | C5M820 | 40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. | 20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. | 0.995 |
CTRG_01546 | CTRG_02811 | C5M6R5 | C5M8T9 | 40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. | Casein kinase I isoform epsilon; Belongs to the protein kinase superfamily. | 0.980 |
CTRG_01546 | CTRG_03084 | C5M6R5 | C5MAJ2 | 40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. | Ribosome biogenesis protein TSR1. | 0.888 |
CTRG_01546 | CTRG_03103 | C5M6R5 | C5MAL1 | 40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. | 40S ribosomal protein S20. | 0.999 |
CTRG_01546 | CTRG_03107 | C5M6R5 | C5MAL5 | 40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. | Serine/threonine-protein kinase RIO2. | 0.931 |
CTRG_01546 | CTRG_03301 | C5M6R5 | C5MB59 | 40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. | S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. | 0.999 |
CTRG_01546 | CTRG_05147 | C5M6R5 | C5MGF4 | 40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. | Protein ENP1. | 0.988 |
CTRG_01546 | CTRG_05780 | C5M6R5 | C5MI87 | 40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. | Uncharacterized protein. | 0.932 |
CTRG_01546 | CTRG_05813 | C5M6R5 | C5MIC0 | 40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. | KH domain-containing protein. | 0.931 |
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