STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTRG_03558BAR domain-containing protein. (279 aa)    
Predicted Functional Partners:
CTRG_05789
Uncharacterized protein.
    
 
0.915
CTRG_00435
Uncharacterized protein.
    
 
 0.860
CTRG_01690
SH3 domain-containing protein.
      
 0.849
CTRG_02909
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 
 0.771
CTRG_00342
Uncharacterized protein.
   
 
 0.745
CTRG_05891
Uncharacterized protein.
   
 
 0.690
CTRG_02764
Uncharacterized protein.
   
 
 0.424
CTRG_05313
DH domain-containing protein.
    
 
 0.404
Your Current Organism:
Candida tropicalis
NCBI taxonomy Id: 294747
Other names: C. tropicalis MYA-3404, Candida tropicalis MYA-3404, Candida tropicalis T1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.