STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTRG_05119Uncharacterized protein. (1565 aa)    
Predicted Functional Partners:
CTRG_00241
Uncharacterized protein.
   
 0.983
CTRG_05291
Myosin IH heavy chain; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 
 0.916
CTRG_02691
Uncharacterized protein.
    
 0.895
CTRG_03158
Cell division control protein 42.
   
 0.887
CTRG_04211
Cell division control protein 42.
   
 0.862
CTRG_03904
Calmodulin; Belongs to the calmodulin family.
    
 0.849
CTRG_00825
C2 domain-containing protein.
    
 
 0.811
CTRG_03626
Actin.
    
 0.795
CTRG_04215
SH3 domain-containing protein.
    
 
 0.754
CTRG_01075
FH2 domain-containing protein.
    
 0.736
Your Current Organism:
Candida tropicalis
NCBI taxonomy Id: 294747
Other names: C. tropicalis MYA-3404, Candida tropicalis MYA-3404, Candida tropicalis T1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.