STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTRG_05356Rab-GAP TBC domain-containing protein. (434 aa)    
Predicted Functional Partners:
CTRG_04343
Septum-promoting GTP-binding protein 1.
   
 0.715
CTRG_00852
GTP-binding protein SAS1.
    
 0.697
CTRG_02930
Tyrosine-protein phosphatase CDC14.
    
 
 0.577
CTRG_04398
Serine/threonine-protein kinase.
    
 
 0.572
CTRG_04408
Uncharacterized protein.
      
 0.554
EXO5
Exonuclease V, mitochondrial; Single strand DNA specific 5' exonuclease involved in mitochondrial DNA replication and recombination. Releases dinucleotides as main products of catalysis. Has the capacity to slide across 5'double-stranded DNA or 5'RNA sequences and resumes cutting two nucleotides downstream of the double-stranded-to-single-stranded junction or RNA-to-DNA junction, respectively (By similarity).
      
 0.553
CTRG_04107
Uncharacterized protein.
      
 0.550
CTRG_00855
Uncharacterized protein.
      
 0.527
CTRG_04295
Uncharacterized protein.
      
 0.513
CTRG_05353
Uncharacterized protein.
      
 0.513
Your Current Organism:
Candida tropicalis
NCBI taxonomy Id: 294747
Other names: C. tropicalis MYA-3404, Candida tropicalis MYA-3404, Candida tropicalis T1
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