Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CTRG_00262 | CTRG_01195 | C5M2H3 | C5M5R5 | Uncharacterized protein. | Cytochrome c oxidase polypeptide VI, mitochondrial. | 0.999 |
CTRG_00262 | CTRG_01250 | C5M2H3 | C5M5W9 | Uncharacterized protein. | Cytochrome c oxidase subunit 6A, mitochondrial. | 0.999 |
CTRG_00262 | CTRG_01253 | C5M2H3 | C5M5X2 | Uncharacterized protein. | Cytochrome c oxidase polypeptide IV, mitochondrial. | 0.999 |
CTRG_00262 | CTRG_01518 | C5M2H3 | C5M6N7 | Uncharacterized protein. | Uncharacterized protein. | 0.999 |
CTRG_00262 | CTRG_01607 | C5M2H3 | C5M6X6 | Uncharacterized protein. | Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C. | 0.999 |
CTRG_00262 | CTRG_01636 | C5M2H3 | C5M705 | Uncharacterized protein. | Cytochrome c1, mitochondrial. | 0.999 |
CTRG_00262 | CTRG_02121 | C5M2H3 | C5M5E3 | Uncharacterized protein. | Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family. | 0.999 |
CTRG_00262 | CTRG_02304 | C5M2H3 | C5M9Z2 | Uncharacterized protein. | Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.999 |
CTRG_00262 | CTRG_03244 | C5M2H3 | C5MB02 | Uncharacterized protein. | Uncharacterized protein. | 0.997 |
CTRG_00262 | CTRG_05841 | C5M2H3 | C5MIE8 | Uncharacterized protein. | Uncharacterized protein. | 0.971 |
CTRG_01195 | CTRG_00262 | C5M5R5 | C5M2H3 | Cytochrome c oxidase polypeptide VI, mitochondrial. | Uncharacterized protein. | 0.999 |
CTRG_01195 | CTRG_01250 | C5M5R5 | C5M5W9 | Cytochrome c oxidase polypeptide VI, mitochondrial. | Cytochrome c oxidase subunit 6A, mitochondrial. | 0.999 |
CTRG_01195 | CTRG_01253 | C5M5R5 | C5M5X2 | Cytochrome c oxidase polypeptide VI, mitochondrial. | Cytochrome c oxidase polypeptide IV, mitochondrial. | 0.999 |
CTRG_01195 | CTRG_01518 | C5M5R5 | C5M6N7 | Cytochrome c oxidase polypeptide VI, mitochondrial. | Uncharacterized protein. | 0.999 |
CTRG_01195 | CTRG_01607 | C5M5R5 | C5M6X6 | Cytochrome c oxidase polypeptide VI, mitochondrial. | Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C. | 0.999 |
CTRG_01195 | CTRG_01636 | C5M5R5 | C5M705 | Cytochrome c oxidase polypeptide VI, mitochondrial. | Cytochrome c1, mitochondrial. | 0.999 |
CTRG_01195 | CTRG_02121 | C5M5R5 | C5M5E3 | Cytochrome c oxidase polypeptide VI, mitochondrial. | Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family. | 0.999 |
CTRG_01195 | CTRG_02304 | C5M5R5 | C5M9Z2 | Cytochrome c oxidase polypeptide VI, mitochondrial. | Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.999 |
CTRG_01195 | CTRG_03244 | C5M5R5 | C5MB02 | Cytochrome c oxidase polypeptide VI, mitochondrial. | Uncharacterized protein. | 0.999 |
CTRG_01195 | CTRG_05841 | C5M5R5 | C5MIE8 | Cytochrome c oxidase polypeptide VI, mitochondrial. | Uncharacterized protein. | 0.990 |
page 1 of 6