STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UTP25U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. (710 aa)    
Predicted Functional Partners:
CTRG_00495
Sas10 domain-containing protein.
   
 0.999
CTRG_01394
U3 small nucleolar RNA-associated protein 22.
   
 0.998
RRP36
rRNA biogenesis protein RRP36; Component of the 90S pre-ribosome involved in the maturation of rRNAs. Required for early cleavages of the pre-RNAs in the 40S ribosomal subunit maturation pathway (By similarity).
   
 0.996
CTRG_02970
Uncharacterized protein.
   
 0.995
CTRG_00592
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 
 0.994
CTRG_01103
Uncharacterized protein.
   
 
 0.994
CTRG_01402
Uncharacterized protein.
   
 
 0.994
CTRG_01392
WD_REPEATS_REGION domain-containing protein.
   
 0.993
CTRG_03183
PINc domain-containing protein.
   
 
 0.992
CTRG_03387
U3 small nucleolar RNA-associated protein 7.
   
 
  0.992
Your Current Organism:
Candida tropicalis
NCBI taxonomy Id: 294747
Other names: C. tropicalis MYA-3404, Candida tropicalis MYA-3404, Candida tropicalis T1
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.