STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CNBG_0548Aromatic-L-amino-acid decarboxylase. (532 aa)    
Predicted Functional Partners:
CNBG_4655
Amine oxidase.
    
 0.898
CNBG_1280
Tryptophan synthase.
    
 0.894
CNBG_1530
Histidinol-phosphate transaminase.
    
 0.881
CNBG_4763
Aspartate aminotransferase.
   
 
 0.881
CNBG_4801
Aspartate aminotransferase.
   
 
 0.881
CNBG_2133
Amine oxidase.
     
 0.879
CNBG_1724
Tryptophan aminotransferase.
    
 0.879
CNBG_1526
Aromatic amino acid aminotransferase I.
    
 0.879
CNBG_1546
Uncharacterized protein.
    
 0.879
CNBG_3517
Tryptophan 2,3-dioxygenase.
   
 
 0.877
Your Current Organism:
Cryptococcus gattii
NCBI taxonomy Id: 294750
Other names: C. gattii VGII R265, Cryptococcus bacillisporus R265, Cryptococcus bacillisporus VGII R265, Cryptococcus deuterogattii R265, Cryptococcus gattii R265, Cryptococcus gattii VGII R265, Cryptococcus neoformans R265
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.