STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CNBG_127350S small subunit ribosomal protein L7e. (250 aa)    
Predicted Functional Partners:
CNBG_0449
Elongation factor 3.
   
 
 0.996
CNBG_1160
Ribosomal protein L29.
  
 0.995
CNBG_3058
60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
  
 0.995
CNBG_5292
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
  
 0.995
CNBG_2614
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
  
 0.995
CNBG_5454
Ribosomal protein L24.
  
 0.995
CNBG_3571
50S small subunit ribosomal protein L5e.
  
 0.995
CNBG_0148
50S small subunit ribosomal protein L27Ae; Belongs to the universal ribosomal protein uL15 family.
  
 0.994
CNBG_0335
60S ribosomal protein.
   
 0.994
CNBG_5013
Ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family.
  
 0.994
Your Current Organism:
Cryptococcus gattii
NCBI taxonomy Id: 294750
Other names: C. gattii VGII R265, Cryptococcus bacillisporus R265, Cryptococcus bacillisporus VGII R265, Cryptococcus deuterogattii R265, Cryptococcus gattii R265, Cryptococcus gattii VGII R265, Cryptococcus neoformans R265
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