STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CNBG_1235Pre-mRNA-splicing factor CLF1. (457 aa)    
Predicted Functional Partners:
CNBG_1218
Pre-mRNA-splicing factor SLT11.
   
 0.999
CNBG_4129
Pre-mRNA-splicing factor SYF1.
   
0.999
CNBG_4437
Pre-mRNA-processing protein 45.
  
 0.999
CNBG_5755
Bud site selection protein 31.
    
 0.999
CNBG_0839
Pre-mRNA-splicing factor ISY1.
   
 0.999
CNBG_0423
Cyclophilin.
   
 0.998
CNBG_2513
Pre-mRNA-splicing factor SYF2.
    
 0.998
CNBG_3119
Pre-mRNA-splicing factor CEF1.
   
 
 0.994
CNBG_0730
Pre-mRNA-splicing factor SLU7.
   
 
 0.991
CNBG_2253
Pre-mRNA-processing factor 17.
   
 
 0.991
Your Current Organism:
Cryptococcus gattii
NCBI taxonomy Id: 294750
Other names: C. gattii VGII R265, Cryptococcus bacillisporus R265, Cryptococcus bacillisporus VGII R265, Cryptococcus deuterogattii R265, Cryptococcus gattii R265, Cryptococcus gattii VGII R265, Cryptococcus neoformans R265
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.