STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CNBG_1733RNase_PH domain-containing protein. (332 aa)    
Predicted Functional Partners:
CNBG_0465
Exosome complex component RRP4.
   
 0.999
CNBG_1090
Exosome complex component RRP43.
   
 0.999
CNBG_3238
Exosome complex component RRP45.
   
 0.999
CNBG_5985
RNase_PH domain-containing protein.
  
 0.999
CNBG_0614
Exosome complex component CSL4.
   
 0.999
CNBG_0709
Exosome complex component RRP40.
  
 0.999
CNBG_5951
RNase_PH domain-containing protein.
  
 0.999
CNBG_5969
ATP-dependent RNA helicase DOB1.
   
 0.990
CNBG_5672
Exosome complex component MTR3.
  
 0.989
CNBG_0366
Exosome complex protein LRP1.
   
 0.986
Your Current Organism:
Cryptococcus gattii
NCBI taxonomy Id: 294750
Other names: C. gattii VGII R265, Cryptococcus bacillisporus R265, Cryptococcus bacillisporus VGII R265, Cryptococcus deuterogattii R265, Cryptococcus gattii R265, Cryptococcus gattii VGII R265, Cryptococcus neoformans R265
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.