STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CNBG_2088Chromosome transmission fidelity protein 8. (268 aa)    
Predicted Functional Partners:
CNBG_5050
Sister chromatid cohesion protein DCC1.
   
 0.999
CNBG_9471
Chromosome transmission fidelity protein 18.
   
 0.994
CNBG_5123
Replication factor C subunit 3/5.
   
 0.948
CNBG_4443
Replication factor C subunit 2/4.
   
 0.940
CNBG_3134
DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.
    
 0.927
CNBG_5512
Replication factor C subunit 3/5.
   
 0.903
CNBG_2268
Replication factor C subunit 2/4.
   
 0.898
CNBG_5535
Uncharacterized protein.
   
 0.841
CNBG_1956
DNA polymerase.
   
 0.797
CNBG_3215
DNA polymerase.
    
 0.766
Your Current Organism:
Cryptococcus gattii
NCBI taxonomy Id: 294750
Other names: C. gattii VGII R265, Cryptococcus bacillisporus R265, Cryptococcus bacillisporus VGII R265, Cryptococcus deuterogattii R265, Cryptococcus gattii R265, Cryptococcus gattii VGII R265, Cryptococcus neoformans R265
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.