STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CNBG_1942Inositol oxygenase. (315 aa)    
Predicted Functional Partners:
CNBG_3347
Inositol-1-monophosphatase.
     
 0.882
CNBG_2334
Inositol-1-monophosphatase.
     
 0.882
CNBG_5738
Inositol oxygenase.
  
  
 
0.873
CNBG_4468
CDP-diacylglycerol-inositol 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.872
CNBG_2676
Hexaprenyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family.
     
 0.613
CNBG_5233
Farnesyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
     
 0.601
CNBG_3720
Uncharacterized protein; Belongs to the glycosyl hydrolase 1 family.
   
 
  0.597
CNBG_3598
Farnesyl-diphosphate farnesyltransferase.
     
 0.595
CNBG_0646
Methylmalonate-semialdehyde dehydrogenase (Acylating).
      
 0.567
CNBG_1310
6-phosphofructo-2-kinase/fructose-2, 6-bisphosphatase.
   
 
  0.460
Your Current Organism:
Cryptococcus gattii
NCBI taxonomy Id: 294750
Other names: C. gattii VGII R265, Cryptococcus bacillisporus R265, Cryptococcus bacillisporus VGII R265, Cryptococcus deuterogattii R265, Cryptococcus gattii R265, Cryptococcus gattii VGII R265, Cryptococcus neoformans R265
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