STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CNBG_4783Chromatin structure-remodeling complex subunit RSC1/2. (793 aa)    
Predicted Functional Partners:
CNBG_5283
Uncharacterized protein.
   
 0.994
CNBG_3077
ATP-dependent helicase STH1/SNF2.
   
0.993
CNBG_1192
Uncharacterized protein.
    
 0.992
CNBG_2314
SWIB domain-containing protein.
    
 0.992
CNBG_5429
Brg1-associated factor b; Belongs to the actin family.
   
 0.989
CNBG_3644
Chromatin structure-remodeling complex subunit SFH1.
    
 0.985
CNBG_3318
Upstream activation factor subunit UAF30.
    
 0.963
CNBG_3797
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.961
CNBG_6125
Chromatin structure-remodeling complex subunit RSC9.
   
 
 0.946
CNBG_5663
Histone H3; Belongs to the histone H3 family.
    
 0.902
Your Current Organism:
Cryptococcus gattii
NCBI taxonomy Id: 294750
Other names: C. gattii VGII R265, Cryptococcus bacillisporus R265, Cryptococcus bacillisporus VGII R265, Cryptococcus deuterogattii R265, Cryptococcus gattii R265, Cryptococcus gattii VGII R265, Cryptococcus neoformans R265
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.