STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CNBG_4785AAT family amino acid transporter. (575 aa)    
Predicted Functional Partners:
CNBG_9257
Anthranilate synthase/indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase.
    
 
 0.679
CNBG_1636
Alpha-glucosidase.
   
 0.599
CNBG_0433
Uncharacterized protein.
   
 0.571
CNBG_2438
Alpha-amylase.
   
 0.571
CNBG_5332
Alpha-amylase.
   
 0.571
CNBG_5792
Alpha-amylase AmyA.
   
 0.571
CNBG_2461
Alpha-1,3-glucan synthase.
   
 0.571
CNBG_3006
Alpha-amylase.
   
 0.571
CNBG_1277
Uncharacterized protein.
    
 0.550
CNBG_1817
Uncharacterized protein.
    
 0.550
Your Current Organism:
Cryptococcus gattii
NCBI taxonomy Id: 294750
Other names: C. gattii VGII R265, Cryptococcus bacillisporus R265, Cryptococcus bacillisporus VGII R265, Cryptococcus deuterogattii R265, Cryptococcus gattii R265, Cryptococcus gattii VGII R265, Cryptococcus neoformans R265
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