STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CNBG_6128Histone H2A; Belongs to the histone H2A family. (131 aa)    
Predicted Functional Partners:
CNBG_6127
Histone H2B; Belongs to the histone H2B family.
 
 0.999
CNBG_3797
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
 
 
 0.998
CNBG_4321
Transcription activator snf2l1.
   
 0.966
CNBG_3265
FACT complex subunit SPT16.
   
 
 0.965
CNBG_9065
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
  0.960
CNBG_1141
DNA-directed RNA polymerase I, II, and III subunit RPABC1.
    
  0.957
CNBG_5663
Histone H3; Belongs to the histone H3 family.
 
 
 0.955
CNBG_6126
Histone H3; Belongs to the histone H3 family.
 
 
 0.955
CNBG_5751
Histone H2A; Belongs to the histone H2A family.
  
0.954
CNBG_5174
DNA-directed RNA polymerase II subunit RPB3.
    
 0.954
Your Current Organism:
Cryptococcus gattii
NCBI taxonomy Id: 294750
Other names: C. gattii VGII R265, Cryptococcus bacillisporus R265, Cryptococcus bacillisporus VGII R265, Cryptococcus deuterogattii R265, Cryptococcus gattii R265, Cryptococcus gattii VGII R265, Cryptococcus neoformans R265
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.