STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CNBG_6052Uncharacterized protein. (479 aa)    
Predicted Functional Partners:
CNBG_0985
Uncharacterized protein.
    
 0.863
CNBG_0769
Nuclear pore complex protein Nup62.
    
 0.762
CNBG_1264
Nucleoporin nsp1.
    
 0.762
CNBG_2770
Uncharacterized protein.
    
 0.760
CNBG_5428
Serine/threonine protein phosphatase 5 phosphatase.
    
 0.747
CNBG_0359
RanBD1 domain-containing protein.
    
 0.745
CNBG_0441
Compass component bre2.
    
 0.729
CNBG_3351
Compass component swd1.
    
 0.728
CNBG_5269
HAD hydrolase.
    
 0.718
CNBG_2897
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.709
Your Current Organism:
Cryptococcus gattii
NCBI taxonomy Id: 294750
Other names: C. gattii VGII R265, Cryptococcus bacillisporus R265, Cryptococcus bacillisporus VGII R265, Cryptococcus deuterogattii R265, Cryptococcus gattii R265, Cryptococcus gattii VGII R265, Cryptococcus neoformans R265
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