STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CNBG_0879CK1/CK1/CK1-D protein kinase; Belongs to the protein kinase superfamily. (331 aa)    
Predicted Functional Partners:
CNBG_2297
Protein LTV1.
    
 0.966
CNBG_0825
Essential nuclear protein 1.
    
 0.903
CNBG_3232
Uncharacterized protein.
    
 0.888
CNBG_4039
Pre-rRNA-processing protein TSR1.
    
 0.853
CNBG_3036
Serine/threonine-protein kinase.
  
 0.814
CNBG_1461
20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family.
    
 0.812
CNBG_6111
CMGC/GSK protein kinase; Belongs to the protein kinase superfamily.
  
 
 0.797
CNBG_0439
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
    
 0.794
CNBG_1323
Pre-rRNA-processing protein PNO1.
    
 0.777
CNBG_1490
F-box/wd-repeat protein lin-23.
   
 0.768
Your Current Organism:
Cryptococcus gattii
NCBI taxonomy Id: 294750
Other names: C. gattii VGII R265, Cryptococcus bacillisporus R265, Cryptococcus bacillisporus VGII R265, Cryptococcus deuterogattii R265, Cryptococcus gattii R265, Cryptococcus gattii VGII R265, Cryptococcus neoformans R265
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