STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CNBG_1719Translation elongation factor Tu. (754 aa)    
Predicted Functional Partners:
CNBG_3591
Peptide chain release factor 1.
   
 0.999
CNBG_2621
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
   
 0.958
CNBG_5344
Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate.
 
  
   0.911
CNBG_0439
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 0.887
CNBG_3332
ATP-dependent helicase.
    
 0.885
CNBG_4547
DNA helicase.
    
 0.885
CNBG_0449
Elongation factor 3.
   
 
 0.868
CNBG_1176
ATP-binding cassette, sub-family E, member 1.
   
 
 0.861
CNBG_4396
Guanine nucleotide-binding protein subunit beta-like protein.
   
 
 0.837
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
   
  0.812
Your Current Organism:
Cryptococcus gattii
NCBI taxonomy Id: 294750
Other names: C. gattii VGII R265, Cryptococcus bacillisporus R265, Cryptococcus bacillisporus VGII R265, Cryptococcus deuterogattii R265, Cryptococcus gattii R265, Cryptococcus gattii VGII R265, Cryptococcus neoformans R265
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