STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CNBG_4784Fungal_trans domain-containing protein. (752 aa)    
Predicted Functional Partners:
CNBG_5690
ESCRT-II complex subunit VPS25.
   
 0.973
CNBG_2560
Vacuolar protein-sorting-associated protein 4; Belongs to the AAA ATPase family.
    
 0.971
CNBG_3856
Vacuolar-sorting protein SNF7.
    
 0.965
CNBG_1836
ESCRT-II complex subunit VPS22.
    
 0.961
CNBG_0321
ESCRT-II complex subunit VPS36.
    
 0.958
CNBG_4384
Charged multivesicular body protein 2A.
   
 0.910
CNBG_1486
Charged multivesicular body protein 3.
    
 0.907
CNBG_1254
Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.
   
 0.862
CNBG_4230
Uncharacterized protein.
    
 0.848
CNBG_1445
Charged multivesicular body protein 1.
   
 0.839
Your Current Organism:
Cryptococcus gattii
NCBI taxonomy Id: 294750
Other names: C. gattii VGII R265, Cryptococcus bacillisporus R265, Cryptococcus bacillisporus VGII R265, Cryptococcus deuterogattii R265, Cryptococcus gattii R265, Cryptococcus gattii VGII R265, Cryptococcus neoformans R265
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.