Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CNBG_0009 | CNBG_0127 | A0A095CXT9 | A0A095C384 | RNA helicase. | Ribosomal RNA methyltransferase Nop2; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.994 |
CNBG_0009 | CNBG_0803 | A0A095CXT9 | A0A095C1Z3 | RNA helicase. | rRNA-processing protein EBP2. | 0.990 |
CNBG_0009 | CNBG_1402 | A0A095CXT9 | A0A095C7D5 | RNA helicase. | Nucleolar protein 53. | 0.605 |
CNBG_0009 | CNBG_1588 | A0A095CXT9 | A0A095C4K0 | RNA helicase. | Nucleolar protein 58. | 0.988 |
CNBG_0009 | CNBG_3589 | A0A095CXT9 | A0A095D9S5 | RNA helicase. | Nucleolar protein 15. | 0.996 |
CNBG_0009 | CNBG_4390 | A0A095CXT9 | A0A095CE90 | RNA helicase. | Nucleolar complex protein 2. | 0.991 |
CNBG_0009 | ERB1 | A0A095CXT9 | A0A095CHM2 | RNA helicase. | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.998 |
CNBG_0009 | NOP7 | A0A095CXT9 | A0A095BZI3 | RNA helicase. | Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.996 |
CNBG_0009 | SPB1 | A0A095CXT9 | A0A095E9Q1 | RNA helicase. | AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | 0.992 |
CNBG_0009 | YTM1 | A0A095CXT9 | A0A095CFW9 | RNA helicase. | Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.994 |
CNBG_0127 | CNBG_0009 | A0A095C384 | A0A095CXT9 | Ribosomal RNA methyltransferase Nop2; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | RNA helicase. | 0.994 |
CNBG_0127 | CNBG_0803 | A0A095C384 | A0A095C1Z3 | Ribosomal RNA methyltransferase Nop2; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | rRNA-processing protein EBP2. | 0.994 |
CNBG_0127 | CNBG_1402 | A0A095C384 | A0A095C7D5 | Ribosomal RNA methyltransferase Nop2; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Nucleolar protein 53. | 0.811 |
CNBG_0127 | CNBG_1588 | A0A095C384 | A0A095C4K0 | Ribosomal RNA methyltransferase Nop2; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Nucleolar protein 58. | 0.979 |
CNBG_0127 | CNBG_3589 | A0A095C384 | A0A095D9S5 | Ribosomal RNA methyltransferase Nop2; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Nucleolar protein 15. | 0.994 |
CNBG_0127 | CNBG_4390 | A0A095C384 | A0A095CE90 | Ribosomal RNA methyltransferase Nop2; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Nucleolar complex protein 2. | 0.996 |
CNBG_0127 | ERB1 | A0A095C384 | A0A095CHM2 | Ribosomal RNA methyltransferase Nop2; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.995 |
CNBG_0127 | NOP7 | A0A095C384 | A0A095BZI3 | Ribosomal RNA methyltransferase Nop2; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.986 |
CNBG_0127 | SPB1 | A0A095C384 | A0A095E9Q1 | Ribosomal RNA methyltransferase Nop2; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | 0.993 |
CNBG_0127 | YTM1 | A0A095C384 | A0A095CFW9 | Ribosomal RNA methyltransferase Nop2; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.989 |
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