STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CNBG_3341Signal recognition particle receptor subunit alpha. (673 aa)    
Predicted Functional Partners:
CNBG_5318
Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.
 
0.998
CNBG_6093
Signal recognition particle receptor subunit beta.
   
 0.996
CNBG_0109
Signal recognition particle subunit SRP72.
   
 0.971
CNBG_2521
Protein transporter SEC61 subunit alpha.
   
 0.970
CNBG_5769
Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family.
   
 0.966
CNBG_9607
Signal recognition particle subunit SRP19.
   
 
 0.957
CNBG_3571
50S small subunit ribosomal protein L5e.
   
 
 0.956
CNBG_5454
Ribosomal protein L24.
   
 
 0.924
CNBG_1160
Ribosomal protein L29.
    
 
 0.920
CNBG_1746
Signal recognition particle subunit SRP9.
   
 0.914
Your Current Organism:
Cryptococcus gattii
NCBI taxonomy Id: 294750
Other names: C. gattii VGII R265, Cryptococcus bacillisporus R265, Cryptococcus bacillisporus VGII R265, Cryptococcus deuterogattii R265, Cryptococcus gattii R265, Cryptococcus gattii VGII R265, Cryptococcus neoformans R265
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.