STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CNBG_9662Glutamate dehydrogenase. (723 aa)    
Predicted Functional Partners:
CNBG_5689
Glutamate synthase (NADPH/NADH).
  
 0.969
CNBG_9661
Uncharacterized protein.
 
     0.949
CNBG_3860
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
    
 0.872
CNBG_4958
Urea carboxylase.
  
 
 0.866
CNBG_4763
Aspartate aminotransferase.
   
 0.855
CNBG_4801
Aspartate aminotransferase.
   
 0.855
CNBG_4647
NADPH:adrenodoxin oxidoreductase, mitochondrial.
  
 0.848
CNBG_9455
Delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.846
CNBG_1454
Glutamine synthetase.
  
 
 0.839
CNBG_5789
Glutamate decarboxylase; Belongs to the group II decarboxylase family.
   
 
 0.834
Your Current Organism:
Cryptococcus gattii
NCBI taxonomy Id: 294750
Other names: C. gattii VGII R265, Cryptococcus bacillisporus R265, Cryptococcus bacillisporus VGII R265, Cryptococcus deuterogattii R265, Cryptococcus gattii R265, Cryptococcus gattii VGII R265, Cryptococcus neoformans R265
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