STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CNBG_9471Chromosome transmission fidelity protein 18. (898 aa)    
Predicted Functional Partners:
CNBG_5050
Sister chromatid cohesion protein DCC1.
   
 0.999
CNBG_2088
Chromosome transmission fidelity protein 8.
   
 0.994
CNBG_5123
Replication factor C subunit 3/5.
   
0.987
CNBG_5512
Replication factor C subunit 3/5.
   
 0.987
CNBG_2268
Replication factor C subunit 2/4.
   
0.985
CNBG_4443
Replication factor C subunit 2/4.
   
0.985
CNBG_3134
DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.
   
 0.985
CNBG_1956
DNA polymerase.
   
 0.981
CNBG_3215
DNA polymerase.
   
 0.964
CNBG_4794
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.954
Your Current Organism:
Cryptococcus gattii
NCBI taxonomy Id: 294750
Other names: C. gattii VGII R265, Cryptococcus bacillisporus R265, Cryptococcus bacillisporus VGII R265, Cryptococcus deuterogattii R265, Cryptococcus gattii R265, Cryptococcus gattii VGII R265, Cryptococcus neoformans R265
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.