STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CNBG_9585Sortilin; Functions as a sorting receptor in the Golgi compartment required for the intracellular sorting and delivery of soluble vacuolar proteins, like carboxypeptidase Y (CPY) and proteinase A. (1482 aa)    
Predicted Functional Partners:
CNBG_9632
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 0.850
CNBG_1774
Proteasome subunit beta.
    
 
 0.843
CNBG_0615
Proteasome subunit alpha type.
    
 
 0.826
CNBG_1678
Proteasome subunit beta.
    
 
 0.826
CNBG_1752
Proteasome endopeptidase complex.
    
 
 0.826
CNBG_5407
Proteasome subunit alpha type.
    
 
 0.826
CNBG_3359
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
    
 
 0.806
CNBG_6170
Uncharacterized protein.
    
 0.793
CNBG_0883
Protein transporter.
    
 0.790
CNBG_3882
Sorting nexin-4.
    
 0.766
Your Current Organism:
Cryptococcus gattii
NCBI taxonomy Id: 294750
Other names: C. gattii VGII R265, Cryptococcus bacillisporus R265, Cryptococcus bacillisporus VGII R265, Cryptococcus deuterogattii R265, Cryptococcus gattii R265, Cryptococcus gattii VGII R265, Cryptococcus neoformans R265
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