STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CNBG_9383U3 small nucleolar RNA-associated protein 13. (903 aa)    
Predicted Functional Partners:
CNBG_2458
Periodic tryptophan protein 2.
  
0.999
CNBG_2683
U3 small nucleolar RNA-associated protein 10.
   
 0.999
CNBG_5433
U3 small nucleolar RNA-associated protein 6.
   
 0.999
CNBG_6177
U3 small nucleolar RNA-associated protein 18.
   
 0.999
CNBG_0714
U3 small nucleolar RNA-associated protein 22.
   
 0.999
CNBG_0729
U3 small nucleolar RNA-associated protein 21.
   
 0.999
CNBG_4589
U3 small nucleolar RNA-associated protein 12.
  
0.999
CNBG_6129
U3 small nucleolar RNA-associated protein 7.
   
 
 0.998
CNBG_4746
Uncharacterized protein.
   
 0.998
CNBG_1588
Nucleolar protein 58.
   
 
 0.997
Your Current Organism:
Cryptococcus gattii
NCBI taxonomy Id: 294750
Other names: C. gattii VGII R265, Cryptococcus bacillisporus R265, Cryptococcus bacillisporus VGII R265, Cryptococcus deuterogattii R265, Cryptococcus gattii R265, Cryptococcus gattii VGII R265, Cryptococcus neoformans R265
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