STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CNBG_9161Uncharacterized protein. (492 aa)    
Predicted Functional Partners:
CNBG_9187
Pre-rRNA-processing protein IPI3.
    
 0.657
CNBG_4427
Transcription initiation factor TFIID subunit 5.
    
 0.635
CNBG_9160
Uncharacterized protein.
 
  
  0.633
CNBG_9174
Serine/threonine-protein kinase TEL1; Belongs to the PI3/PI4-kinase family.
    
 0.613
CNBG_1297
Transformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family.
    
  0.591
CNBG_3170
Transcription initiation factor TFIID subunit 9B.
    
  0.588
CNBG_5765
Protein BMH2; Belongs to the 14-3-3 family.
    
 0.585
CNBG_2377
SAGA-associated factor 73.
    
  0.583
CNBG_5713
Transcription initiation protein SPT3.
    
 0.583
CNBG_2974
Transcription initiation factor TFIID subunit 10.
    
  0.569
Your Current Organism:
Cryptococcus gattii
NCBI taxonomy Id: 294750
Other names: C. gattii VGII R265, Cryptococcus bacillisporus R265, Cryptococcus bacillisporus VGII R265, Cryptococcus deuterogattii R265, Cryptococcus gattii R265, Cryptococcus gattii VGII R265, Cryptococcus neoformans R265
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.