STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gnlGluconolactonase precursor. (300 aa)    
Predicted Functional Partners:
CNF50588.1
ABC-type sugar transport system%2C periplasmic component.
 
     0.867
alsC_1
Ribose transport system permease; Belongs to the binding-protein-dependent transport system permease family.
 
     0.770
dlgD
2%2C3-diketo-L-gulonate reductase; Catalyzes the reduction of 2,3-diketo-L-gulonate in the presence of NADH, to form 3-keto-L-gulonate.
 
     0.752
rbsA_1
Putative sugar transport system%2C ATP-binding protein.
 
 
   0.632
CNG72457.1
Uncharacterised protein.
  
     0.506
gfo_3
oxidoreductase%2C NAD-binding.
 
  
 0.505
lyx_1
Putative L-xylulose kinase; Belongs to the FGGY kinase family.
 
  
 0.493
CNG05320.1
Uncharacterised protein.
 
   
 0.468
CNG87055.1
Putative hydrolase.
 
     0.460
pgl
6-phosphogluconolactonase; Catalyzes the hydrolysis of 6-phosphogluconolactone to 6- phosphogluconate.
  
  
 0.458
Your Current Organism:
Yersinia frederiksenii
NCBI taxonomy Id: 29484
Other names: ATCC 33641, CCUG 11293, CIP 80.29, DSM 18490, NCTC 11470, Y. frederiksenii, strain 6175
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.