Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CNF55320.1 | CNF55348.1 | ERS008455_00548 | ERS008455_00549 | Uncharacterised protein. | Uncharacterized conserved protein. | 0.773 |
CNF55320.1 | CNF55376.1 | ERS008455_00548 | ERS008455_00550 | Uncharacterised protein. | Uncharacterized conserved protein. | 0.468 |
CNF55320.1 | CNF55433.1 | ERS008455_00548 | ERS008455_00552 | Uncharacterised protein. | Putative bacteriophage integrase. | 0.418 |
CNF55320.1 | xerD_1 | ERS008455_00548 | ERS008455_00551 | Uncharacterised protein. | Integrase family protein. | 0.468 |
CNF55348.1 | CNF55320.1 | ERS008455_00549 | ERS008455_00548 | Uncharacterized conserved protein. | Uncharacterised protein. | 0.773 |
CNF55348.1 | CNF55376.1 | ERS008455_00549 | ERS008455_00550 | Uncharacterized conserved protein. | Uncharacterized conserved protein. | 0.874 |
CNF55348.1 | CNF55433.1 | ERS008455_00549 | ERS008455_00552 | Uncharacterized conserved protein. | Putative bacteriophage integrase. | 0.418 |
CNF55348.1 | xerD_1 | ERS008455_00549 | ERS008455_00551 | Uncharacterized conserved protein. | Integrase family protein. | 0.468 |
CNF55376.1 | CNF55320.1 | ERS008455_00550 | ERS008455_00548 | Uncharacterized conserved protein. | Uncharacterised protein. | 0.468 |
CNF55376.1 | CNF55348.1 | ERS008455_00550 | ERS008455_00549 | Uncharacterized conserved protein. | Uncharacterized conserved protein. | 0.874 |
CNF55376.1 | CNF55433.1 | ERS008455_00550 | ERS008455_00552 | Uncharacterized conserved protein. | Putative bacteriophage integrase. | 0.678 |
CNF55376.1 | CNF55467.1 | ERS008455_00550 | ERS008455_00553 | Uncharacterized conserved protein. | Phage tail completion protein. | 0.490 |
CNF55376.1 | xerD_1 | ERS008455_00550 | ERS008455_00551 | Uncharacterized conserved protein. | Integrase family protein. | 0.773 |
CNF55433.1 | CNF55320.1 | ERS008455_00552 | ERS008455_00548 | Putative bacteriophage integrase. | Uncharacterised protein. | 0.418 |
CNF55433.1 | CNF55348.1 | ERS008455_00552 | ERS008455_00549 | Putative bacteriophage integrase. | Uncharacterized conserved protein. | 0.418 |
CNF55433.1 | CNF55376.1 | ERS008455_00552 | ERS008455_00550 | Putative bacteriophage integrase. | Uncharacterized conserved protein. | 0.678 |
CNF55433.1 | CNF55467.1 | ERS008455_00552 | ERS008455_00553 | Putative bacteriophage integrase. | Phage tail completion protein. | 0.856 |
CNF55433.1 | CNF90793.1 | ERS008455_00552 | ERS008455_01495 | Putative bacteriophage integrase. | Phage capsid scaffolding. | 0.527 |
CNF55433.1 | CNG90084.1 | ERS008455_00552 | ERS008455_04106 | Putative bacteriophage integrase. | Gluconate periplasmic binding protein. | 0.468 |
CNF55433.1 | xerC | ERS008455_00552 | ERS008455_04228 | Putative bacteriophage integrase. | Site-specific tyrosine recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. Binds cooperatively to specific DNA consensus sequences that are separated from XerD binding sites by a short central region, forming the heterotetrameric XerC-XerD complex that recombines DNA substrates. The complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. In the complex XerC specifical [...] | 0.436 |
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