STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CNF82587.1Putative virulence factor. (317 aa)    
Predicted Functional Partners:
yeeA
Putative inner membrane protein.
  
     0.637
yejM
Hydrolase of alkaline phosphatase superfamily.
  
     0.534
macB_4
Macrolide transporter ATP-binding /permease; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
       0.498
macA_2
Macrolide transporter subunit MacA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.491
yfgJ
Protein of uncharacterised function (DUF1407).
  
     0.484
yccS_2
YccS/YhfK family integral membrane protein.
  
     0.482
appA_1
Phosphoanhydride phosphorylase.
  
     0.472
ampE
Regulatory protein AmpE.
  
     0.438
CNF41177.1
Uncharacterized protein conserved in bacteria.
  
     0.423
Your Current Organism:
Yersinia frederiksenii
NCBI taxonomy Id: 29484
Other names: ATCC 33641, CCUG 11293, CIP 80.29, DSM 18490, NCTC 11470, Y. frederiksenii, strain 6175
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.