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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glnPGlutamine ABC transporter permease. (218 aa)    
Predicted Functional Partners:
glnH_2
Glutamine ABC transporter periplasmic protein; Belongs to the bacterial solute-binding protein 3 family.
 0.999
glnQ_1
Glutamine ABC transporter ATP-binding protein.
 0.997
artI3
Arginine-binding periplasmic protein 1; Belongs to the bacterial solute-binding protein 3 family.
   0.981
glnH_1
ABC transporter%2C periplasmic arginine-bindingprotein artI precursor.
   0.980
artJ
ABC transporter%2C periplasmic arginine-bindingprotein artI precursor; Belongs to the bacterial solute-binding protein 3 family.
   0.979
fliY_1
Cystine transporter subunit; Belongs to the bacterial solute-binding protein 3 family.
   0.974
tcyC
Putative amino-acid ABC transporter ATP-binding protein YecC.
   0.895
argT
Amino acid-binding periplasmic protein; Belongs to the bacterial solute-binding protein 3 family.
   0.888
artM_1
ABC transporter ATP-binding protein.
   0.887
gltL
Putative glutamate/aspartate ABC transporter ATP-binding protein.
   0.887
Your Current Organism:
Yersinia frederiksenii
NCBI taxonomy Id: 29484
Other names: ATCC 33641, CCUG 11293, CIP 80.29, DSM 18490, NCTC 11470, Y. frederiksenii, strain 6175
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