STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CNG07658.1Protein of uncharacterised function (DUF2843). (301 aa)    
Predicted Functional Partners:
mrfC_2
Fimbrial outer membrane usher protein.
  
     0.560
lrpC
Transcription regulator AsnC.
       0.551
rcsB_1
LuxR family regulatory protein.
  
     0.528
CNF45410.1
Uncharacterized conserved protein.
  
     0.498
mrfC_1
Fimbrial outer membrane usher protein.
  
     0.490
fimD_3
Outer membrane usher protein.
  
     0.472
shlA_1
Hemagglutinin/adhesin repeat-containing protein.
  
     0.463
cdh
CDP-diacylglycerol pyrophosphatase.
  
     0.453
yeeA
Putative inner membrane protein.
  
     0.447
yqiG
Outer membrane fimbrial usher porin.
  
     0.447
Your Current Organism:
Yersinia frederiksenii
NCBI taxonomy Id: 29484
Other names: ATCC 33641, CCUG 11293, CIP 80.29, DSM 18490, NCTC 11470, Y. frederiksenii, strain 6175
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.