Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CNG11370.1 | dnaK | ERS008455_02012 | ERS008455_00711 | Fic family protein. | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.417 |
CNG11370.1 | dnaK1 | ERS008455_02012 | ERS008455_01677 | Fic family protein. | Chaperone. | 0.417 |
CNG11370.1 | hscA | ERS008455_02012 | ERS008455_01615 | Fic family protein. | Chaperone protein HscA; Chaperone involved in the maturation of iron-sulfur cluster- containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB. Involved in the maturation of IscU. | 0.417 |
CNG11370.1 | vapC | ERS008455_02012 | ERS008455_03643 | Fic family protein. | Virulence associated protein C; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | 0.497 |
CNG11370.1 | ybaQ | ERS008455_02012 | ERS008455_03592 | Fic family protein. | Uncharacterized HTH-type transcriptional regulator ybaQ. | 0.424 |
dnaK | CNG11370.1 | ERS008455_00711 | ERS008455_02012 | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | Fic family protein. | 0.417 |
dnaK1 | CNG11370.1 | ERS008455_01677 | ERS008455_02012 | Chaperone. | Fic family protein. | 0.417 |
hscA | CNG11370.1 | ERS008455_01615 | ERS008455_02012 | Chaperone protein HscA; Chaperone involved in the maturation of iron-sulfur cluster- containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB. Involved in the maturation of IscU. | Fic family protein. | 0.417 |
vapC | CNG11370.1 | ERS008455_03643 | ERS008455_02012 | Virulence associated protein C; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | Fic family protein. | 0.497 |
vapC | ybaQ | ERS008455_03643 | ERS008455_03592 | Virulence associated protein C; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | Uncharacterized HTH-type transcriptional regulator ybaQ. | 0.497 |
ybaQ | CNG11370.1 | ERS008455_03592 | ERS008455_02012 | Uncharacterized HTH-type transcriptional regulator ybaQ. | Fic family protein. | 0.424 |
ybaQ | vapC | ERS008455_03592 | ERS008455_03643 | Uncharacterized HTH-type transcriptional regulator ybaQ. | Virulence associated protein C; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | 0.497 |