Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
arsH | limB | ERS008455_04153 | ERS008455_02512 | Arsenic resistance protein ArsH. | Luciferase-like monooxygenase family protein. | 0.443 |
dhbF | limB | ERS008455_01408 | ERS008455_02512 | Nonribosomal peptide synthetase. | Luciferase-like monooxygenase family protein. | 0.623 |
dhbF | tycC | ERS008455_01408 | ERS008455_01740 | Nonribosomal peptide synthetase. | Putative siderophore biosysnthesis protein. | 0.989 |
limB | arsH | ERS008455_02512 | ERS008455_04153 | Luciferase-like monooxygenase family protein. | Arsenic resistance protein ArsH. | 0.443 |
limB | dhbF | ERS008455_02512 | ERS008455_01408 | Luciferase-like monooxygenase family protein. | Nonribosomal peptide synthetase. | 0.623 |
limB | ssuA | ERS008455_02512 | ERS008455_02845 | Luciferase-like monooxygenase family protein. | Alkanesulfonate transporter substrate-binding subunit. | 0.449 |
limB | ssuB | ERS008455_02512 | ERS008455_02847 | Luciferase-like monooxygenase family protein. | ABC transporter ATP-binding protein. | 0.401 |
limB | ssuE | ERS008455_02512 | ERS008455_03436 | Luciferase-like monooxygenase family protein. | Putative NAD(P)H-dependent FMN reductase. | 0.443 |
limB | tycC | ERS008455_02512 | ERS008455_01740 | Luciferase-like monooxygenase family protein. | Putative siderophore biosysnthesis protein. | 0.650 |
ssuA | limB | ERS008455_02845 | ERS008455_02512 | Alkanesulfonate transporter substrate-binding subunit. | Luciferase-like monooxygenase family protein. | 0.449 |
ssuA | ssuB | ERS008455_02845 | ERS008455_02847 | Alkanesulfonate transporter substrate-binding subunit. | ABC transporter ATP-binding protein. | 0.949 |
ssuB | limB | ERS008455_02847 | ERS008455_02512 | ABC transporter ATP-binding protein. | Luciferase-like monooxygenase family protein. | 0.401 |
ssuB | ssuA | ERS008455_02847 | ERS008455_02845 | ABC transporter ATP-binding protein. | Alkanesulfonate transporter substrate-binding subunit. | 0.949 |
ssuE | limB | ERS008455_03436 | ERS008455_02512 | Putative NAD(P)H-dependent FMN reductase. | Luciferase-like monooxygenase family protein. | 0.443 |
tycC | dhbF | ERS008455_01740 | ERS008455_01408 | Putative siderophore biosysnthesis protein. | Nonribosomal peptide synthetase. | 0.989 |
tycC | limB | ERS008455_01740 | ERS008455_02512 | Putative siderophore biosysnthesis protein. | Luciferase-like monooxygenase family protein. | 0.650 |