Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
arcA_1 | argG | ERS008455_00636 | ERS008455_01852 | Arginine deiminase. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 2 subfamily. | 0.917 |
arcA_1 | argH | ERS008455_00636 | ERS008455_04090 | Arginine deiminase. | Argininosuccinate lyase. | 0.927 |
arcA_1 | argI | ERS008455_00636 | ERS008455_02553 | Arginine deiminase. | Ornithine carbamoyltransferase subunit I; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.959 |
argA | argB | ERS008455_02059 | ERS008455_04091 | N-acetylglutamate synthase; Belongs to the acetyltransferase family. ArgA subfamily. | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate. | 0.989 |
argA | argC | ERS008455_02059 | ERS008455_04092 | N-acetylglutamate synthase; Belongs to the acetyltransferase family. ArgA subfamily. | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. | 0.972 |
argA | argD | ERS008455_02059 | ERS008455_02900 | N-acetylglutamate synthase; Belongs to the acetyltransferase family. ArgA subfamily. | Bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Involved in both the arginine and lysine biosynthetic pathways; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | 0.858 |
argA | argG | ERS008455_02059 | ERS008455_01852 | N-acetylglutamate synthase; Belongs to the acetyltransferase family. ArgA subfamily. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 2 subfamily. | 0.974 |
argA | argH | ERS008455_02059 | ERS008455_04090 | N-acetylglutamate synthase; Belongs to the acetyltransferase family. ArgA subfamily. | Argininosuccinate lyase. | 0.938 |
argA | argI | ERS008455_02059 | ERS008455_02553 | N-acetylglutamate synthase; Belongs to the acetyltransferase family. ArgA subfamily. | Ornithine carbamoyltransferase subunit I; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.895 |
argA | argR | ERS008455_02059 | ERS008455_02479 | N-acetylglutamate synthase; Belongs to the acetyltransferase family. ArgA subfamily. | Arginine repressor; Regulates arginine biosynthesis genes. | 0.826 |
argA | astC | ERS008455_02059 | ERS008455_01057 | N-acetylglutamate synthase; Belongs to the acetyltransferase family. ArgA subfamily. | Succinylornithine transaminase; Catalyzes the transamination of N(2)-succinylornithine and alpha-ketoglutarate into N(2)-succinylglutamate semialdehyde and glutamate. Can also act as an acetylornithine aminotransferase. Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. AstC subfamily. | 0.859 |
argA | carB | ERS008455_02059 | ERS008455_00725 | N-acetylglutamate synthase; Belongs to the acetyltransferase family. ArgA subfamily. | Carbamoyl phosphate synthase large subunit; Belongs to the CarB family. | 0.704 |
argB | argA | ERS008455_04091 | ERS008455_02059 | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate. | N-acetylglutamate synthase; Belongs to the acetyltransferase family. ArgA subfamily. | 0.989 |
argB | argC | ERS008455_04091 | ERS008455_04092 | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate. | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. | 0.999 |
argB | argD | ERS008455_04091 | ERS008455_02900 | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate. | Bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Involved in both the arginine and lysine biosynthetic pathways; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | 0.889 |
argB | argG | ERS008455_04091 | ERS008455_01852 | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 2 subfamily. | 0.925 |
argB | argH | ERS008455_04091 | ERS008455_04090 | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate. | Argininosuccinate lyase. | 0.972 |
argB | argI | ERS008455_04091 | ERS008455_02553 | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate. | Ornithine carbamoyltransferase subunit I; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.834 |
argB | argR | ERS008455_04091 | ERS008455_02479 | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate. | Arginine repressor; Regulates arginine biosynthesis genes. | 0.781 |
argB | astC | ERS008455_04091 | ERS008455_01057 | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate. | Succinylornithine transaminase; Catalyzes the transamination of N(2)-succinylornithine and alpha-ketoglutarate into N(2)-succinylglutamate semialdehyde and glutamate. Can also act as an acetylornithine aminotransferase. Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. AstC subfamily. | 0.889 |
page 1 of 5