STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fliA_2Flagellar biosynthesis sigma factor. (240 aa)    
Predicted Functional Partners:
flgC_2
Flagellar basal body rod protein FlgC.
 
 
 0.906
flgB_2
Flagellar basal body rod protein FlgB.
 
 
 0.886
flgL_2
Flagellar hook-associated protein FlgL.
 
  
 0.880
flgC_1
Flagellar basal body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
 
 
 0.876
flgF_2
Flagellar basal body rod protein FlgF.
 
  
 0.869
flgB_1
Flagellar basal body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
 
 0.868
flgE_2
Flagellar hook protein FlgE.
 
  
 0.868
flgK_2
Flagellar hook-associated protein FlgK.
 
  
 0.865
flgM_2
Anti-sigma-28 factor FlgM.
  
 
 0.853
fliM_2
Flagellar motor switch protein FliM.
 
 
 0.850
Your Current Organism:
Yersinia frederiksenii
NCBI taxonomy Id: 29484
Other names: ATCC 33641, CCUG 11293, CIP 80.29, DSM 18490, NCTC 11470, Y. frederiksenii, strain 6175
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.