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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
metN_3Putative ABC transport ATP-binding subunit; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. (328 aa)    
Predicted Functional Partners:
metI_2
Putative ABC transport integral membrane subunit.
 
 
 0.996
metQ_2
Methionine ABC transporter substrate-binding protein; Belongs to the nlpA lipoprotein family.
 
 
 0.984
metI_3
ABC transporter permease.
 
 
 0.948
metI_1
DL-methionine transporter permease.
 
 
 0.947
metQ_1
DL-methionine transporter substrate-binding subunit; Belongs to the nlpA lipoprotein family.
 
 
 0.932
metQ_3
Methionine ABC transporter substrate-binding protein.
 
 
 0.932
mdl
Putative multidrug transporter membraneATP-binding components.
 
     
0.738
efe
Putative iron/ascorbate oxidoreductase family protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
 
    0.702
CNG55187.1
Uncharacterised protein.
       0.658
gsiA_5
Putative ABC transporter transporter%2C ATP-binding protein.
 
    
0.633
Your Current Organism:
Yersinia frederiksenii
NCBI taxonomy Id: 29484
Other names: ATCC 33641, CCUG 11293, CIP 80.29, DSM 18490, NCTC 11470, Y. frederiksenii, strain 6175
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