elaB_2 protein (Yersinia frederiksenii) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

elaB_2

Putative inner membrane protein. (102 aa)

Predicted Functional Partners:

yqjE

0.927

CNG57714.1

0.782

dps

0.725

elaB_3

0.697

CNF49689.1

0.683

elaB_1

0.680

CNF55118.1

0.606

CNF50111.1

0.582

yeiU

0.554

osmY_1

0.546

Your Current Organism:

Yersinia frederiksenii

NCBI taxonomy Id: 29484
Other names: ATCC 33641, CCUG 11293, CIP 80.29, DSM 18490, NCTC 11470, Y. frederiksenii, strain 6175

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CNF49689.1	CNF50111.1	ERS008455_00375	ERS008455_00387	Protein YeaG.	SpoVR family protein.	0.977
CNF49689.1	dps	ERS008455_00375	ERS008455_01352	Protein YeaG.	DNA starvation/stationary phase protection protein Dps; During stationary phase, binds the chromosome non- specifically, forming a highly ordered and stable dps-DNA co-crystal within which chromosomal DNA is condensed and protected from diverse damages. It protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral, which can be released after reduction. One hydrogen peroxide oxidizes two Fe(2+) ions, which prevents hydroxyl radical production by the Fenton reaction; Belongs to the Dps family.	0.585
CNF49689.1	elaB_1	ERS008455_00375	ERS008455_03111	Protein YeaG.	Membrane protein YqjD.	0.590
CNF49689.1	elaB_2	ERS008455_00375	ERS008455_03397	Protein YeaG.	Putative inner membrane protein.	0.683
CNF49689.1	elaB_3	ERS008455_00375	ERS008455_03873	Protein YeaG.	Elab protein.	0.529
CNF50111.1	CNF49689.1	ERS008455_00387	ERS008455_00375	SpoVR family protein.	Protein YeaG.	0.977
CNF50111.1	elaB_2	ERS008455_00387	ERS008455_03397	SpoVR family protein.	Putative inner membrane protein.	0.582
CNF55118.1	CNG57714.1	ERS008455_00541	ERS008455_03109	Protein of uncharacterised function (DUF2594).	Inner membrane protein YqjK.	0.773
CNF55118.1	elaB_1	ERS008455_00541	ERS008455_03111	Protein of uncharacterised function (DUF2594).	Membrane protein YqjD.	0.610
CNF55118.1	elaB_2	ERS008455_00541	ERS008455_03397	Protein of uncharacterised function (DUF2594).	Putative inner membrane protein.	0.606
CNF55118.1	yqjE	ERS008455_00541	ERS008455_03110	Protein of uncharacterised function (DUF2594).	Inner membrane protein YqjE.	0.770
CNG57714.1	CNF55118.1	ERS008455_03109	ERS008455_00541	Inner membrane protein YqjK.	Protein of uncharacterised function (DUF2594).	0.773
CNG57714.1	elaB_1	ERS008455_03109	ERS008455_03111	Inner membrane protein YqjK.	Membrane protein YqjD.	0.976
CNG57714.1	elaB_2	ERS008455_03109	ERS008455_03397	Inner membrane protein YqjK.	Putative inner membrane protein.	0.782
CNG57714.1	elaB_3	ERS008455_03109	ERS008455_03873	Inner membrane protein YqjK.	Elab protein.	0.676
CNG57714.1	yeiU	ERS008455_03109	ERS008455_03030	Inner membrane protein YqjK.	Undecaprenyl pyrophosphate phosphatase; Involved in the modification of the lipid A domain of lipopolysaccharides (LPS). Transfers a phosphate group from undecaprenyl pyrophosphate (C55-PP) to lipid A to form lipid A 1- diphosphate. Contributes to the recycling of undecaprenyl phosphate (C55-P); Belongs to the LpxT phosphotransferase family.	0.677
CNG57714.1	yqjE	ERS008455_03109	ERS008455_03110	Inner membrane protein YqjK.	Inner membrane protein YqjE.	0.979
dps	CNF49689.1	ERS008455_01352	ERS008455_00375	DNA starvation/stationary phase protection protein Dps; During stationary phase, binds the chromosome non- specifically, forming a highly ordered and stable dps-DNA co-crystal within which chromosomal DNA is condensed and protected from diverse damages. It protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral, which can be released after reduction. One hydrogen peroxide oxidizes two Fe(2+) ions, which prevents hydroxyl radical production by the Fenton reaction; Belongs to the Dps family.	Protein YeaG.	0.585
dps	elaB_1	ERS008455_01352	ERS008455_03111	DNA starvation/stationary phase protection protein Dps; During stationary phase, binds the chromosome non- specifically, forming a highly ordered and stable dps-DNA co-crystal within which chromosomal DNA is condensed and protected from diverse damages. It protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral, which can be released after reduction. One hydrogen peroxide oxidizes two Fe(2+) ions, which prevents hydroxyl radical production by the Fenton reaction; Belongs to the Dps family.	Membrane protein YqjD.	0.623
dps	elaB_2	ERS008455_01352	ERS008455_03397	DNA starvation/stationary phase protection protein Dps; During stationary phase, binds the chromosome non- specifically, forming a highly ordered and stable dps-DNA co-crystal within which chromosomal DNA is condensed and protected from diverse damages. It protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral, which can be released after reduction. One hydrogen peroxide oxidizes two Fe(2+) ions, which prevents hydroxyl radical production by the Fenton reaction; Belongs to the Dps family.	Putative inner membrane protein.	0.725