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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ssuEPutative NAD(P)H-dependent FMN reductase. (190 aa)    
Predicted Functional Partners:
fixL
Two-component sensor kinase.
       0.523
fixJ_2
Transcriptional regulator fixJ.
       0.523
yghU
Putative S-transferase.
  
    0.493
dsbA_1
Putative thiol:disulfide interchange protein.
 
    0.445
tar
Putative methyl-accepting chemotaxis receptor protein.
       0.444
ssuD
Alkanesulfonate monooxygenase.
  
 
 0.443
limB
Luciferase-like monooxygenase family protein.
  
 
 0.443
CNG69673.1
Domain of uncharacterised function (DUF336).
 
     0.417
Your Current Organism:
Yersinia frederiksenii
NCBI taxonomy Id: 29484
Other names: ATCC 33641, CCUG 11293, CIP 80.29, DSM 18490, NCTC 11470, Y. frederiksenii, strain 6175
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.