Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
faeE | fim | CH64_144 | CH64_148 | Hypothetical protein; Pili and flagellar-assembly chaperone, PapD N-terminal domain protein. | Fimbrial family protein. | 0.889 |
faeE | fimC_2 | CH64_144 | CH64_147 | Hypothetical protein; Pili and flagellar-assembly chaperone, PapD N-terminal domain protein. | Hypothetical protein; Pili and flagellar-assembly chaperone, PapD N-terminal domain protein. | 0.678 |
faeE | fimD_2 | CH64_144 | CH64_146 | Hypothetical protein; Pili and flagellar-assembly chaperone, PapD N-terminal domain protein. | papC N-terminal domain protein. | 0.974 |
faeE | fimF | CH64_144 | CH64_616 | Hypothetical protein; Pili and flagellar-assembly chaperone, PapD N-terminal domain protein. | Fimbrial family protein. | 0.852 |
faeE | sfaA_2 | CH64_144 | CH64_3128 | Hypothetical protein; Pili and flagellar-assembly chaperone, PapD N-terminal domain protein. | Putative fimbrial protein. | 0.907 |
fim | faeE | CH64_148 | CH64_144 | Fimbrial family protein. | Hypothetical protein; Pili and flagellar-assembly chaperone, PapD N-terminal domain protein. | 0.889 |
fim | fimC_1 | CH64_148 | CH64_613 | Fimbrial family protein. | Hypothetical protein; Pili and flagellar-assembly chaperone, PapD N-terminal domain protein. | 0.796 |
fim | fimC_2 | CH64_148 | CH64_147 | Fimbrial family protein. | Hypothetical protein; Pili and flagellar-assembly chaperone, PapD N-terminal domain protein. | 0.912 |
fim | fimC_3 | CH64_148 | CH64_2749 | Fimbrial family protein. | Hypothetical protein; Pili and flagellar-assembly chaperone, PapD N-terminal domain protein. | 0.821 |
fim | fimC_4 | CH64_148 | CH64_2746 | Fimbrial family protein. | Hypothetical protein; Pili and flagellar-assembly chaperone, PapD N-terminal domain protein. | 0.826 |
fim | fimD_2 | CH64_148 | CH64_146 | Fimbrial family protein. | papC N-terminal domain protein. | 0.901 |
fim | fimF | CH64_148 | CH64_616 | Fimbrial family protein. | Fimbrial family protein. | 0.732 |
fim | focC | CH64_148 | CH64_3129 | Fimbrial family protein. | Hypothetical protein; Pili and flagellar-assembly chaperone, PapD N-terminal domain protein. | 0.801 |
fim | papD_1 | CH64_148 | CH64_3395 | Fimbrial family protein. | Hypothetical protein; Pili and flagellar-assembly chaperone, PapD N-terminal domain protein. | 0.722 |
fimC_1 | fim | CH64_613 | CH64_148 | Hypothetical protein; Pili and flagellar-assembly chaperone, PapD N-terminal domain protein. | Fimbrial family protein. | 0.796 |
fimC_1 | fimD_2 | CH64_613 | CH64_146 | Hypothetical protein; Pili and flagellar-assembly chaperone, PapD N-terminal domain protein. | papC N-terminal domain protein. | 0.899 |
fimC_1 | fimF | CH64_613 | CH64_616 | Hypothetical protein; Pili and flagellar-assembly chaperone, PapD N-terminal domain protein. | Fimbrial family protein. | 0.908 |
fimC_1 | sfaA_2 | CH64_613 | CH64_3128 | Hypothetical protein; Pili and flagellar-assembly chaperone, PapD N-terminal domain protein. | Putative fimbrial protein. | 0.900 |
fimC_2 | faeE | CH64_147 | CH64_144 | Hypothetical protein; Pili and flagellar-assembly chaperone, PapD N-terminal domain protein. | Hypothetical protein; Pili and flagellar-assembly chaperone, PapD N-terminal domain protein. | 0.678 |
fimC_2 | fim | CH64_147 | CH64_148 | Hypothetical protein; Pili and flagellar-assembly chaperone, PapD N-terminal domain protein. | Fimbrial family protein. | 0.912 |
page 1 of 4